If the captain orders the WEAP to hold fire on the torpedoes, take power away from the torpedo system and put it into beams. (Clear this procedure with the captain first, so as to avoid problems.) Depending on the situation, you could instead put the energy into Maneuver, Shields, etc.
When I'm captain, I prefer to have one "tick" of energy just floating free if possible, just to be able to quickly boost some needed system without drawing that power from somewhere else.
Also, it will probably fall to ENG to keep an eye on the ship's energy levels, so don't be shy about reporting them to the captain.